1BP_GENERATE_HISTOGRAM(1U)ser Contributed Perl DocumentatiBoPn_GENERATE_HISTOGRAM(1)
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NAME

6       generate_histogram.pl -- Generate a histogram of Bio::DB::GFF features
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SYNOPSIS

9         generate_histogram.pl -d gadfly variation gene:curated
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DESCRIPTION

12       Use this utility to generate feature density histograms from
13       Bio::DB::GFF databases.  The result is a GFF data file that is suitable
14       for loading with load_gff.pl.
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16   OPTIONS
17       The following options are recognized:
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19         Option        Description
20         ------        -----------
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22          --dsn        <dsn>       Data source (default dbi:mysql:test)
23          --adaptor    <adaptor>   Schema adaptor (default dbi::mysqlopt)
24          --user       <user>      Username for mysql authentication
25          --pass       <password>  Password for mysql authentication
26          --aggregator <list>      Comma-separated list of aggregators
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BUGS

29       Please report them.
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SEE ALSO

32       Bio::DB::GFF
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AUTHOR

35       Lincoln Stein <lstein@cshl.org>
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37       Copyright (c) 2001 Cold Spring Harbor Laboratory
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39       This library is free software; you can redistribute it and/or modify it
40       under the same terms as Perl itself.  See DISCLAIMER.txt for
41       disclaimers of warranty.
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45perl v5.12.0                      2010-04-29          BP_GENERATE_HISTOGRAM(1)