1BP_MUTATE(1) User Contributed Perl Documentation BP_MUTATE(1)
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6 mutate.pl - randomly mutagenize a single protein or DNA sequence
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9 ./mutate.pl -p 25 -i test.fa -n 5 -f swiss -o muts.swiss
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11 #or
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13 ./mutate.pl --percent=25 --input=test.fa --number=5 -output=x.fa
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16 Randomly mutagenize a single protein or DNA sequence one or more times.
17 Specify percentage mutated and number of resulting mutant sequences.
18 Print mutagenized sequences to STDOUT or write to an output file.
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20 -h|--help Help
21 -p|--percent Percent mutagenized
22 -n|--number Number of mutant sequences created
23 -o|--output Output file (optional)
24 -f|--format Output format (default: fasta)
25 -i|--input Input file
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28 User feedback is an integral part of the evolution of this and other
29 Bioperl scripts. Send your comments and suggestions to the Bioperl
30 mailing list. Your participation is much appreciated.
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32 bioperl-l@bioperl.org - General discussion
33 http://bioperl.org/wiki/Mailing_lists - About the mailing lists
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35 Reporting Bugs
36 Report bugs to the Bioperl bug tracking system to help us keep track of
37 the bugs and their resolution. Bug reports can be submitted via the
38 web:
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40 http://bugzilla.open-bio.org/
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43 Brian Osborne, bosborne at alum.mit.edu
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47perl v5.12.0 2010-04-29 BP_MUTATE(1)