1BP_MUTATE(1)          User Contributed Perl Documentation         BP_MUTATE(1)
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NAME

6       mutate.pl - randomly mutagenize a single protein or DNA sequence
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SYNOPSIS

9         ./mutate.pl -p 25 -i test.fa -n 5 -f swiss -o muts.swiss
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11         #or
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13         ./mutate.pl --percent=25 --input=test.fa --number=5 -output=x.fa
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DESCRIPTION

16       Randomly mutagenize a single protein or DNA sequence one or more times.
17       Specify percentage mutated and number of resulting mutant sequences.
18       Print mutagenized sequences to STDOUT or write to an output file.
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20         -h|--help    Help
21         -p|--percent Percent mutagenized
22         -n|--number  Number of mutant sequences created
23         -o|--output  Output file (optional)
24         -f|--format  Output format (default: fasta)
25         -i|--input   Input file
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FEEDBACK

28       User feedback is an integral part of the evolution of this and other
29       Bioperl scripts. Send your comments and suggestions to the Bioperl
30       mailing list.  Your participation is much appreciated.
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32         bioperl-l@bioperl.org                  - General discussion
33         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists
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35   Reporting Bugs
36       Report bugs to the Bioperl bug tracking system to help us keep track of
37       the bugs and their resolution. Bug reports can be submitted via the
38       web:
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40         http://bugzilla.open-bio.org/
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AUTHOR

43       Brian Osborne, bosborne at alum.mit.edu
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47perl v5.12.0                      2010-04-29                      BP_MUTATE(1)