1csg_dlptopol(1) General Commands Manual csg_dlptopol(1)
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6 csg_dlptopol - Part of the VOTCA package
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10 csg_dlptopol [OPTION] [OPTIONPARAMETERS]
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14 Create a dlpoly topology template based on an existing (atomistic)
15 topology and a mapping xml-file. The created template file needs to be
16 inspected and amended by the user!
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19 Please visit the program site at __http://www.votca.org__.
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23 Allowed options:
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26 -h [ --help ]
27 display this help and exit
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29 -v [ --verbose ]
30 be loud and noisy
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32 --top arg
33 atomistic topology file
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35 --out arg
36 output topology in dlpoly format
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39 Mapping options:
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42 --cg arg
43 coarse graining mapping and bond definitions (xml-file)
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45 --map-ignore arg
46 list of molecules to ignore separated by ;
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48 --no-map
49 disable mapping and act on original trajectory
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53 · csg_dlptopol --top .dlpf --out .dlpf --cg cg-map.xml convert
54 FIELD to FIELD_CGV using cg-map.xml
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56 · csg_dlptopol --top FA-dlpoly.dlpf --out CG-dlpoly.dlpf --cg
57 cg-map.xml
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59 · csg_dlptopol --top FA-gromacs.tpr --out FA-dlpoly.dlpf
60 --no-map
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64 Written and maintained by the VOTCA Development Team <devs@votca.org>
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67 This Manual Page was converted from t2t format to the this format by
68 txt2tags (http://txt2tags.org) ! The t2t file was extracted from
69 'csg_dlptopol --help' by help2t2t (version 1.5 )
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73 Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)
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76 Licensed under the Apache License, Version 2.0 (the "License"); you may
77 not use this file except in compliance with the License. You may
78 obtain a copy of the License at
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81 http://www.apache.org/licenses/LICENSE-2.0
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84 Unless required by applicable law or agreed to in writing, software
85 distributed under the License is distributed on an "AS IS" BASIS, WITH‐
86 OUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
87 See the License for the specific language governing permissions and
88 limitations under the License.
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95Version: 1.5 2019-02-17 00:15:52 csg_dlptopol(1)