1Ace::Graphics::Glyph::sUesgemrenCtosn(t3r)ibuted Perl DoAccuem:e:nGtraatpihoincs::Glyph::segments(3)
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NAME

6       Ace::Graphics::Glyph::segments - The "discontinuous segments" glyph
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SYNOPSIS

9         See L<Ace::Graphics::Panel> and L<Ace::Graphics::Glyph>.
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DESCRIPTION

12       This glyph draws a sequence feature that consists of multiple
13       discontinuous segments, such as the exons on a transcript or a gapped
14       alignment.  The representation is a series of filled rectangles
15       connected by line segments.
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17       The features passed to it must either respond to the
18       Bio::SequenceFeatureI-style subSeqFeatures() method, or the
19       AcePerl/Das-style segments() or merged_segments() methods.
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21   OPTIONS
22       In addition to the common options, this glyph recognizes the
23       b<-stranded> argument.  If b<-stranded> is true and the feature is an
24       alignment (has the target() method) then the glyph will draw little
25       arrows in the segment boxes to indicate the direction of the alignment.
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BUGS

28       Please report them.
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SEE ALSO

31       Ace::Sequence, Ace::Sequence::Feature, Ace::Graphics::Panel,
32       Ace::Graphics::Track, Ace::Graphics::Glyph::anchored_arrow,
33       Ace::Graphics::Glyph::arrow, Ace::Graphics::Glyph::box,
34       Ace::Graphics::Glyph::primers, Ace::Graphics::Glyph::segments,
35       Ace::Graphics::Glyph::toomany, Ace::Graphics::Glyph::transcript,
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AUTHOR

38       Lincoln Stein <lstein@cshl.org>.
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40       Copyright (c) 2001 Cold Spring Harbor Laboratory
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42       This library is free software; you can redistribute it and/or modify it
43       under the same terms as Perl itself.  See DISCLAIMER.txt for
44       disclaimers of warranty.
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48perl v5.30.1                      2020-01-29 Ace::Graphics::Glyph::segments(3)
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