1CSG_SPHERICALORDER(1)       General Commands Manual      CSG_SPHERICALORDER(1)
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NAME

6       csg_sphericalorder - Part of the VOTCA package
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SYNOPSIS

11       csg_sphericalorder [OPTIONS]
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13       csg_sphericalorder [--help]
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DESCRIPTION

18       !! EXPERIMENTAL !! Calculate spherical order parameter.
19        Needs non-spherical beads in mapping.
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OPTIONS

28       Allowed options:
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30         -h [ --help ]             display this help and exit
31         --verbose                 be loud and noisy
32         --verbose1                be very loud and noisy
33         -v [ --verbose2 ]         be extremly loud and noisy
34         --top arg                 atomistic topology file
35         --filter arg (=*)       filter molecule names
36         --radialcut arg (=0)    radial cutoff: distance from center where
37       bead is
38                                 considered
39         --minrad arg (=0)       minimal distance a parcle has to be apart
40       from center
41                                 to be considerd
42         --refmol arg            Reference molecule
43         --rbinw arg (=0)        Do multiple r_bins multiple histograms
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45       Mapping options:
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47         --cg arg                  coarse graining mapping and bond
48       definitions
49                                 (xml-file)
50         --map-ignore arg          list of molecules to ignore separated by ;
51         --no-map                  disable mapping and act on original
52       trajectory
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54       Trajectory options:
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56         --trj arg                 atomistic trajectory file
57         --begin arg (=0)          skip frames before this time (only works
58       for
59                                 Gromacs files)
60         --first-frame arg (=0)    start with this frame
61         --nframes arg             process the given number of frames
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AUTHORS

65       Written and maintained by the VOTCA Development Team <devs@votca.org>
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70       Copyright 2009-2021 The VOTCA Development Team (http://www.votca.org)
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72       Licensed under the Apache License, Version 2.0 (the "License"); you may
73       not use this  file except in compliance with the License.  You may
74       obtain a copy of the License at
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76              http://www.apache.org/licenses/LICENSE-2.0
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78       Unless  required by applicable law or agreed to in writing, software
79       distributed under the License is distributed on an "AS IS" BASIS,
80       WITHOUT WARRANTIES OR CONDITIONS OF ANY  KIND, either  express  or
81       implied.   See  the  License  for  the  specific  language  governing
82       permissions and limitations under the License.
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87VOTCA Development Team   csg_sphericalorder User Manual  CSG_SPHERICALORDER(1)
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