1MCTC-CONVERT(1) MCTC-CONVERT(1)
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6 mctc-convert - Convert between supported input formats of the tool
7 chain library
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10 mctc-convert [options] input output
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13 Read structure from input file and writes it to output file. The format
14 is determined by the file extension or the format hint. The input
15 structure can be read from standard input by providing - as argument.
16 Similarly, the output structure can be written to standard output with
17 - as argument. Standard input and standard output should be combined
18 with a format hint option.
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20 Supported formats:
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22 • Xmol/xyz files (xyz, log)
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24 • Turbomole’s coord, riper’s periodic coord (tmol, coord)
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26 • DFTB+ genFormat geometry inputs as cluster, supercell or fractional
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29 • VASP’s POSCAR/CONTCAR input files (vasp, poscar, contcar)
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31 • Protein Database files, only single files (pdb)
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33 • Connection table files, molfile (mol) and structure data format
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36 • Gaussian’s external program input (ein)
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38 • JSON input with qcschema_molecule or qcschema_input structure
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41 • FHI-AIMS' input files (geometry.in)
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43 • Q-Chem molecule block inputs (qchem)
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46 -i, --input format
47 Hint for the format of the input file
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49 -o, --output format
50 Hint for the format of the output file
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52 --normalize
53 Normalize all element symbols to capitalized format
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55 --template file
56 File to use as template to fill in meta data (useful to add back
57 SDF or PDB annotions). Transfers lattice, periodicity, comments and
58 format specific annotations from the template to the input
59 structure. If the standard input, -, is provided the template
60 structure will be read before the input structure.
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62 --template-format format
63 Hint for the format of the template file (only used if template
64 file name is provided)
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66 --ignore-dot-files
67 Do not read charge and spin from .CHRG and .UHF files
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69 --version
70 Print program version and exit
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72 --help
73 Show this help message
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77 2022-06-15 MCTC-CONVERT(1)