1BP_GENERATE_HISTOGRAM(1U)ser Contributed Perl DocumentatiBoPn_GENERATE_HISTOGRAM(1)
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NAME

6       generate_histogram.pl -- Generate a histogram of Bio::DB::GFF features
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SYNOPSIS

9         generate_histogram.pl -d gadfly variation gene:curated
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DESCRIPTION

12       Use this utility to generate feature density histograms from
13       Bio::DB::GFF databases.  The result is a GFF data file that is suitable
14       for loading with load_gff.pl.
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16       OPTIONS
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18       The following options are recognized:
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20         Option        Description
21         ------        -----------
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23          --dsn        <dsn>       Data source (default dbi:mysql:test)
24          --adaptor    <adaptor>   Schema adaptor (default dbi::mysqlopt)
25          --user       <user>      Username for mysql authentication
26          --pass       <password>  Password for mysql authentication
27          --aggregator <list>      Comma-separated list of aggregators
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BUGS

30       Please report them.
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SEE ALSO

33       Bio::DB::GFF
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AUTHOR

36       Lincoln Stein <lstein@cshl.org>
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38       Copyright (c) 2001 Cold Spring Harbor Laboratory
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40       This library is free software; you can redistribute it and/or modify it
41       under the same terms as Perl itself.  See DISCLAIMER.txt for dis‐
42       claimers of warranty.
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46perl v5.8.8                       2007-05-07          BP_GENERATE_HISTOGRAM(1)