1BP_TREE2PAG(1)        User Contributed Perl Documentation       BP_TREE2PAG(1)
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NAME

6       tree2pag - convert Bio::TreeIO parseable format trees to pagel format
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SYNOPSIS

9        tree2pag -if nexus -i file.nexus > file.pag
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11        # OR pipe in through STDIN, and use newick format instead
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13        cat file.newick ⎪ tree2pag -if newick > file.nh
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15        # OR specify an output and input
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17        tree2pag -o file.pag -i file.newick
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DESCRIPTION

20       Convert TreeIO parseable files into Pagel format tree files.  Be warned
21       that pagel format only really supports a single tree per file so.  Also
22       Pagel parsing is not yet available in bioperl.
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26perl v5.8.8                       2007-05-07                    BP_TREE2PAG(1)
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