1BP_AACOMP(1) User Contributed Perl Documentation BP_AACOMP(1)
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6 aacomp - amino acid composition of protein sequences
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9 aacomp [-f/--format FORMAT] [-h/--help] filename
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11 aacomp [-f/--format FORMAT] < filename
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13 aacomp [-f/--format FORMAT] -i filename
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16 This scripts prints out the count of amino acids over all protein
17 sequences from the input file.
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20 The default sequence format is fasta.
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22 The sequence input can be provided using any of the three methods:
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24 unnamed argument
25 aacomp filename
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27 named argument
28 aacomp -i filename
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30 standard input
31 aacomp < filename
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34 Mailing Lists
35 User feedback is an integral part of the evolution of this and other
36 Bioperl modules. Send your comments and suggestions preferably to the
37 Bioperl mailing list. Your participation is much appreciated.
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39 bioperl-l@bioperl.org - General discussion
40 http://bioperl.org/wiki/Mailing_lists - About the mailing lists
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42 Reporting Bugs
43 Report bugs to the Bioperl bug tracking system to help us keep track of
44 the bugs and their resolution. Bug reports can be submitted via the
45 web:
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47 http://bugzilla.open-bio.org/
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50 Email jason@bioperl.org
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53 Based on aacomp.c from an old version of EMBOSS
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57perl v5.12.0 2010-04-29 BP_AACOMP(1)