1BP_AACOMP(1)          User Contributed Perl Documentation         BP_AACOMP(1)
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NAME

6       aacomp - amino acid composition of protein sequences
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SYNOPSIS

9         aacomp [-f/--format FORMAT] [-h/--help] filename
10         or
11         aacomp [-f/--format FORMAT] < filename
12         or
13         aacomp [-f/--format FORMAT] -i filename
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DESCRIPTION

16       This scripts prints out the count of amino acids over all protein
17       sequences from the input file.
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OPTIONS

20       The default sequence format is fasta.
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22       The sequence input can be provided using any of the three methods:
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24       unnamed argument
25            aacomp filename
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27       named argument
28            aacomp -i filename
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30       standard input
31            aacomp < filename
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FEEDBACK

34       Mailing Lists
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36       User feedback is an integral part of the evolution of this and other
37       Bioperl modules. Send your comments and suggestions preferably to the
38       Bioperl mailing list.  Your participation is much appreciated.
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40         bioperl-l@bioperl.org                  - General discussion
41         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists
42
43       Reporting Bugs
44
45       Report bugs to the Bioperl bug tracking system to help us keep track of
46       the bugs and their resolution. Bug reports can be submitted via the
47       web:
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49         http://bugzilla.open-bio.org/
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AUTHOR - Jason Stajich

52       Email jason@bioperl.org
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HISTORY

55       Based on aacomp.c from an old version of EMBOSS
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59perl v5.8.8                       2007-05-07                      BP_AACOMP(1)