1csg_stat(1)                 General Commands Manual                csg_stat(1)
2
3
4

NAME

6       csg_stat - Part of the VOTCA package
7
8

SYNOPSIS

10       csg_stat [OPTION] [OPTIONPARAMETERS]
11
12

DESCRIPTION

14       Calculate  all  distributions  (bonded  and  non-bonded)  specified  in
15       options file.  Optionally calculates update  matrix  for  invere  Monte
16       Carlo.  This  program  is  called  inside  the  inverse scripts. Unlike
17       csg_boltzmann, big systems can be treated as well as non-bonded  inter‐
18       actions can be evaluated.
19
20
21       Please visit the program site at __http://www.votca.org__.
22
23

OPTIONS

25       Allowed options:
26
27
28       -h [ --help ]
29              produce this help message
30
31       --top arg
32              atomistic topology file
33
34
35       Mapping options:
36
37
38       --cg arg
39              [OPTIONAL] coarse graining mapping definitions (xml-file). If no
40              file is given, program acts on original trajectory
41
42
43       Specific options:
44
45
46       --options arg
47              options file for coarse graining
48
49       --do-imc
50              write out Inverse Monte Carlo data
51
52       --write-every arg
53              write after every block of this length, if  --blocking  is  set,
54              the averages are cleared after every output
55
56       --do-blocks
57              write output for blocking analysis
58
59
60       Threading options:
61
62
63       --nt arg (=1)
64              number of threads
65
66
67       Trajectory options:
68
69
70       --trj arg
71              atomistic trajectory file
72
73       --begin arg (=0)
74              skip frames before this time
75
76       --first-frame arg (=0)
77              start with this frame
78
79       --nframes arg
80              process the given number of frames
81
82

AUTHORS

84       Written and maintained by the VOTCA Development Team <devs@votca.org>
85
86
87       This  Manual  Page  was converted from t2t format to the this format by
88       txt2tags (http://txt2tags.org) !   The  t2t  file  was  extracted  from
89       'csg_stat --help' by help2t2t (version 1.2.1 )
90
91
93       Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)
94
95
96       Licensed under the Apache License, Version 2.0 (the "License"); you may
97       not use this file except in  compliance  with  the  License.   You  may
98       obtain a copy of the License at
99
100
101           http://www.apache.org/licenses/LICENSE-2.0
102
103
104       Unless  required  by  applicable  law or agreed to in writing, software
105       distributed under the License is distributed on an "AS IS" BASIS, WITH‐
106       OUT  WARRANTIES  OR  CONDITIONS OF ANY KIND, either express or implied.
107       See the License for the specific  language  governing  permissions  and
108       limitations under the License.
109
110
111
112
113
114
115Version: 1.2.1           Thu Aug 25 20:00:29 UTC 2011              csg_stat(1)
Impressum