1csg_stat(1) General Commands Manual csg_stat(1)
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6 csg_stat - Part of the VOTCA package
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10 csg_stat [OPTION] [OPTIONPARAMETERS]
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14 Calculate all distributions (bonded and non-bonded) specified in
15 options file. Optionally calculates update matrix for invere Monte
16 Carlo. This program is called inside the inverse scripts. Unlike
17 csg_boltzmann, big systems can be treated as well as non-bonded inter‐
18 actions can be evaluated.
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21 Please visit the program site at __http://www.votca.org__.
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25 Allowed options:
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28 -h [ --help ]
29 produce this help message
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31 --top arg
32 atomistic topology file
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35 Mapping options:
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38 --cg arg
39 [OPTIONAL] coarse graining mapping definitions (xml-file). If no
40 file is given, program acts on original trajectory
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43 Specific options:
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46 --options arg
47 options file for coarse graining
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49 --do-imc
50 write out Inverse Monte Carlo data
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52 --write-every arg
53 write after every block of this length, if --blocking is set,
54 the averages are cleared after every output
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56 --do-blocks
57 write output for blocking analysis
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60 Threading options:
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63 --nt arg (=1)
64 number of threads
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67 Trajectory options:
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70 --trj arg
71 atomistic trajectory file
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73 --begin arg (=0)
74 skip frames before this time
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76 --first-frame arg (=0)
77 start with this frame
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79 --nframes arg
80 process the given number of frames
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84 Written and maintained by the VOTCA Development Team <devs@votca.org>
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87 This Manual Page was converted from t2t format to the this format by
88 txt2tags (http://txt2tags.org) ! The t2t file was extracted from
89 'csg_stat --help' by help2t2t (version 1.2.1 )
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93 Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)
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96 Licensed under the Apache License, Version 2.0 (the "License"); you may
97 not use this file except in compliance with the License. You may
98 obtain a copy of the License at
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101 http://www.apache.org/licenses/LICENSE-2.0
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104 Unless required by applicable law or agreed to in writing, software
105 distributed under the License is distributed on an "AS IS" BASIS, WITH‐
106 OUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
107 See the License for the specific language governing permissions and
108 limitations under the License.
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115Version: 1.2.1 Thu Aug 25 20:00:29 UTC 2011 csg_stat(1)