1Ace::Graphics::Glyph::tUrsaenrscCroinpttr(i3b)uted PerlADcoec:u:mGernatpahtiicosn::Glyph::transcript(3)
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NAME

6       Ace::Graphics::Glyph::transcript - The "gene" glyph
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SYNOPSIS

9         See L<Ace::Graphics::Panel> and L<Ace::Graphics::Glyph>.
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DESCRIPTION

12       This glyph draws a series of filled rectangles connected by up-angled
13       connectors or "hats".  The rectangles indicate exons; the hats are
14       introns.  The direction of transcription is indicated by a small arrow
15       at the end of the glyph, rightward for the + strand.
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17       The feature must respond to the exons() and optionally introns()
18       methods, or it will default to the generic display.  Implied introns
19       (not returned by the introns() method) are drawn in a contrasting color
20       to explicit introns.
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22   OPTIONS
23       In addition to the common options, the following glyph-specific option
24       is recognized:
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26         Option                Description                    Default
27         ------                -----------                    -------
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29         -implied_intron_color The color to use for gaps      gray
30                               not returned by the introns()
31                               method.
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33         -draw_arrow           Whether to draw arrowhead      true
34                               indicating direction of
35                               transcription.
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BUGS

38       Please report them.
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SEE ALSO

41       Ace::Sequence, Ace::Sequence::Feature, Ace::Graphics::Panel,
42       Ace::Graphics::Track, Ace::Graphics::Glyph::anchored_arrow,
43       Ace::Graphics::Glyph::arrow, Ace::Graphics::Glyph::box,
44       Ace::Graphics::Glyph::primers, Ace::Graphics::Glyph::segments,
45       Ace::Graphics::Glyph::toomany, Ace::Graphics::Glyph::transcript,
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AUTHOR

48       Lincoln Stein <lstein@cshl.org>.
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50       Copyright (c) 2001 Cold Spring Harbor Laboratory
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52       This library is free software; you can redistribute it and/or modify it
53       under the same terms as Perl itself.  See DISCLAIMER.txt for
54       disclaimers of warranty.
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58perl v5.12.0                      2001-05-22Ace::Graphics::Glyph::transcript(3)
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