gv(3r) - f32

1gv(3r)                                                                  gv(3r)
2
3
4

NAME

6       gv_R - graph manipulation in R
7
8

SYNOPSIS

10       System.loadLibrary("gv");
11
12

USAGE

INTRODUCTION

15       gv_R  is  a  dynamically loaded extension for R that provides access to
16       the graph facilities of graphviz.
17
18

COMMANDS

20       New graphs
21
22       New empty graph
23              SWIGTYPE_p_Agraph_t gv.graph (string name);
24              SWIGTYPE_p_Agraph_t gv.digraph (string name);
25              SWIGTYPE_p_Agraph_t gv.strictgraph (string name);
26              SWIGTYPE_p_Agraph_t gv.strictdigraph (string name);
27
28       New graph from a dot-syntax string or file
29              SWIGTYPE_p_Agraph_t gv.readstring (string string);
30              SWIGTYPE_p_Agraph_t gv.read (string filename);
31              SWIGTYPE_p_Agraph_t gv.read (SWIGTYPE_p_FILE f);
32
33       Add new subgraph to existing graph
34              SWIGTYPE_p_Agraph_t  gv.graph  (SWIGTYPE_p_Agraph_t  g,   string
35              name);
36
37       New nodes
38
39       Add new node to existing graph
40              SWIGTYPE_p_Agnode_t   gv.node   (SWIGTYPE_p_Agraph_t  g,  string
41              name);
42
43       New edges
44
45       Add new edge between existing nodes
46              SWIGTYPE_p_Agedge_t  gv.edge   (SWIGTYPE_p_Agnode_t   t,   SWIG‐
47              TYPE_p_Agnode_t h);
48
49       Add  a  new  edge  between an existing tail node, and a named head node
50       which will be induced in the graph if it doesn't already exist
51              SWIGTYPE_p_Agedge_t  gv.edge  (SWIGTYPE_p_Agnode_t   t,   string
52              hname);
53
54       Add  a  new  edge  between an existing head node, and a named tail node
55       which will be induced in the graph if it doesn't already exist
56              SWIGTYPE_p_Agedge_t gv.edge (string  tname,  SWIGTYPE_p_Agnode_t
57              h);
58
59       Add a new edge between named tail  and head nodes which will be induced
60       in the graph if they don't already exist
61              SWIGTYPE_p_Agedge_t  gv.edge  (SWIGTYPE_p_Agraph_t   g,   string
62              tname, string hname);
63
64       Setting attribute values
65
66       Set value of named attribute of graph/node/edge - creating attribute if
67       necessary
68              string gv.setv (SWIGTYPE_p_Agraph_t g, string attr, string val);
69              string gv.setv (SWIGTYPE_p_Agnode_t n, string attr, string val);
70              string gv.setv (SWIGTYPE_p_Agedge_t e, string attr, string val);
71
72       Set value of existing attribute  of  graph/node/edge  (using  attribute
73       handle)
74              string  gv.setv  (SWIGTYPE_p_Agraph_t  g,  SWIGTYPE_p_Agsym_t a,
75              string val);
76              string gv.setv  (SWIGTYPE_p_Agnode_t  n,  SWIGTYPE_p_Agsym_t  a,
77              string val);
78              string  gv.setv  (SWIGTYPE_p_Agedge_t  e,  SWIGTYPE_p_Agsym_t a,
79              string val);
80
81       Getting attribute values
82
83       Get value of named attribute of graph/node/edge
84              string gv.getv (SWIGTYPE_p_Agraph_t g, string attr);
85              string gv.getv (SWIGTYPE_p_Agnode_t n, string attr);
86              string gv.getv (SWIGTYPE_p_Agedge_t e, string attr);
87
88       Get value of attribute of graph/node/edge (using attribute handle)
89              string gv.getv (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agsym_t a);
90              string gv.getv (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agsym_t a);
91              string gv.getv (SWIGTYPE_p_Agedge_t e, SWIGTYPE_p_Agsym_t a);
92
93       Obtain names from handles
94              string gv.nameof (SWIGTYPE_p_Agraph_t g);
95              string gv.nameof (SWIGTYPE_p_Agnode_t n);
96              string gv.nameof (SWIGTYPE_p_Agsym_t a);
97
98       Find handles from names
99              SWIGTYPE_p_Agraph_t gv.findsubg (SWIGTYPE_p_Agraph_t  g,  string
100              name);
101              SWIGTYPE_p_Agnode_t  gv.findnode  (SWIGTYPE_p_Agraph_t g, string
102              name);
103              SWIGTYPE_p_Agedge_t gv.findedge  (SWIGTYPE_p_Agnode_t  t,  SWIG‐
104              TYPE_p_Agnode_t h);
105              SWIGTYPE_p_Agsym_t  gv.findattr  (SWIGTYPE_p_Agraph_t  g, string
106              name);
107              SWIGTYPE_p_Agsym_t gv.findattr  (SWIGTYPE_p_Agnode_t  n,  string
108              name);
109              SWIGTYPE_p_Agsym_t  gv.findattr  (SWIGTYPE_p_Agedge_t  e, string
110              name);
111
112       Misc graph navigators returning handles
113              SWIGTYPE_p_Agnode_t gv.headof (SWIGTYPE_p_Agedge_t e);
114              SWIGTYPE_p_Agnode_t gv.tailof (SWIGTYPE_p_Agedge_t e);
115              SWIGTYPE_p_Agraph_t gv.graphof (SWIGTYPE_p_Agraph_t g);
116              SWIGTYPE_p_Agraph_t gv.graphof (SWIGTYPE_p_Agedge_t e);
117              SWIGTYPE_p_Agraph_t gv.graphof (SWIGTYPE_p_Agnode_t n);
118              SWIGTYPE_p_Agraph_t gv.rootof (SWIGTYPE_p_Agraph_t g);
119
120       Obtain handles of proto node/edge for setting default attribute values
121              SWIGTYPE_p_Agnode_t gv.protonode (SWIGTYPE_p_Agraph_t g);
122              SWIGTYPE_p_Agedge_t gv.protoedge (SWIGTYPE_p_Agraph_t g);
123
124       Iterators
125
126       Iteration termination tests
127              bool gv.ok (SWIGTYPE_p_Agraph_t g);
128              bool gv.ok (SWIGTYPE_p_Agnode_t n);
129              bool gv.ok (SWIGTYPE_p_Agedge_t e);
130              bool gv.ok (SWIGTYPE_p_Agsym_t a);
131
132       Iterate over subgraphs of a graph
133              SWIGTYPE_p_Agraph_t gv.firstsubg (SWIGTYPE_p_Agraph_t g);
134              SWIGTYPE_p_Agraph_t gv.nextsubg  (SWIGTYPE_p_Agraph_t  g,  SWIG‐
135              TYPE_p_Agraph_t sg);
136
137       Iterate over supergraphs of a graph (obscure and rarely useful)
138              SWIGTYPE_p_Agraph_t gv.firstsupg (SWIGTYPE_p_Agraph_t g);
139              SWIGTYPE_p_Agraph_t  gv.nextsupg  (SWIGTYPE_p_Agraph_t  g, SWIG‐
140              TYPE_p_Agraph_t sg);
141
142       Iterate over edges of a graph
143              SWIGTYPE_p_Agedge_t gv.firstedge (SWIGTYPE_p_Agraph_t g);
144              SWIGTYPE_p_Agedge_t gv.nextedge  (SWIGTYPE_p_Agraph_t  g,  SWIG‐
145              TYPE_p_Agedge_t e);
146
147       Iterate over outedges of a graph
148              SWIGTYPE_p_Agedge_t gv.firstout (SWIGTYPE_p_Agraph_t g);
149              SWIGTYPE_p_Agedge_t  gv.nextout  (SWIGTYPE_p_Agraph_t  g,  SWIG‐
150              TYPE_p_Agedge_t e);
151
152       Iterate over edges of a node
153              SWIGTYPE_p_Agedge_t gv.firstedge (SWIGTYPE_p_Agnode_t n);
154              SWIGTYPE_p_Agedge_t gv.nextedge  (SWIGTYPE_p_Agnode_t  n,  SWIG‐
155              TYPE_p_Agedge_t e);
156
157       Iterate over out-edges of a node
158              SWIGTYPE_p_Agedge_t gv.firstout (SWIGTYPE_p_Agnode_t n);
159              SWIGTYPE_p_Agedge_t  gv.nextout  (SWIGTYPE_p_Agnode_t  n,  SWIG‐
160              TYPE_p_Agedge_t e);
161
162       Iterate over head nodes reachable from out-edges of a node
163              SWIGTYPE_p_Agnode_t gv.firsthead (SWIGTYPE_p_Agnode_t n);
164              SWIGTYPE_p_Agnode_t gv.nexthead  (SWIGTYPE_p_Agnode_t  n,  SWIG‐
165              TYPE_p_Agnode_t h);
166
167       Iterate over in-edges of a graph
168              SWIGTYPE_p_Agedge_t gv.firstin (SWIGTYPE_p_Agraph_t g);
169              SWIGTYPE_p_Agedge_t   gv.nextin  (SWIGTYPE_p_Agnode_t  n,  SWIG‐
170              TYPE_p_Agedge_t e);
171
172       Iterate over in-edges of a node
173              SWIGTYPE_p_Agedge_t gv.firstin (SWIGTYPE_p_Agnode_t n);
174              SWIGTYPE_p_Agedge_t  gv.nextin  (SWIGTYPE_p_Agraph_t  g,   SWIG‐
175              TYPE_p_Agedge_t e);
176
177       Iterate over tail nodes reachable from in-edges of a node
178              SWIGTYPE_p_Agnode_t gv.firsttail (SWIGTYPE_p_Agnode_t n);
179              SWIGTYPE_p_Agnode_t  gv.nexttail  (SWIGTYPE_p_Agnode_t  n, SWIG‐
180              TYPE_p_Agnode_t t);
181
182       Iterate over nodes of a graph
183              SWIGTYPE_p_Agnode_t gv.firstnode (SWIGTYPE_p_Agraph_t g);
184              SWIGTYPE_p_Agnode_t gv.nextnode  (SWIGTYPE_p_Agraph_t  g,  SWIG‐
185              TYPE_p_Agnode_t n);
186
187       Iterate over nodes of an edge
188              SWIGTYPE_p_Agnode_t gv.firstnode (SWIGTYPE_p_Agedge_t e);
189              SWIGTYPE_p_Agnode_t  gv.nextnode  (SWIGTYPE_p_Agedge_t  e, SWIG‐
190              TYPE_p_Agnode_t n);
191
192       Iterate over attributes of a graph
193              SWIGTYPE_p_Agsym_t gv.firstattr (SWIGTYPE_p_Agraph_t g);
194              SWIGTYPE_p_Agsym_t  gv.nextattr  (SWIGTYPE_p_Agraph_t  g,  SWIG‐
195              TYPE_p_Agsym_t a);
196
197       Iterate over attributes of an edge
198              SWIGTYPE_p_Agsym_t gv.firstattr (SWIGTYPE_p_Agedge_t e);
199              SWIGTYPE_p_Agsym_t  gv.nextattr  (SWIGTYPE_p_Agedge_t  e,  SWIG‐
200              TYPE_p_Agsym_t a);
201
202       Iterate over attributes of a node
203              SWIGTYPE_p_Agsym_t gv.firstattr (SWIGTYPE_p_Agnode_t n);
204              SWIGTYPE_p_Agsym_t  gv.nextattr  (SWIGTYPE_p_Agnode_t  n,  SWIG‐
205              TYPE_p_Agsym_t a);
206
207       Remove graph objects
208              bool gv.rm (SWIGTYPE_p_Agraph_t g);
209              bool gv.rm (SWIGTYPE_p_Agnode_t n);
210              bool gv.rm (SWIGTYPE_p_Agedge_t e);
211
212       Layout
213
214       Annotate  a  graph  with  layout attributes and values using a specific
215       layout engine
216              bool gv.layout (SWIGTYPE_p_Agraph_t g, string engine);
217
218       Render
219
220       Render a layout into attributes of the graph
221              bool gv.render (SWIGTYPE_p_Agraph_t g);
222
223       Render a layout to stdout
224              bool gv.render (SWIGTYPE_p_Agraph_t g, string format);
225
226       Render to an open file
227              bool gv.render  (SWIGTYPE_p_Agraph_t  g,  string  format,  SWIG‐
228              TYPE_p_FILE fout);
229
230       Render a layout to an unopened file by name
231              bool  gv.render  (SWIGTYPE_p_Agraph_t  g,  string format, string
232              filename);
233
234       Render to a string result
235              string gv.renderresult (SWIGTYPE_p_Agraph_t ing, string format);
236              gv.renderresult (SWIGTYPE_p_Agraph_t g,  string  format,  string
237              outdata);
238
239       Render to an open channel
240              bool  gv.renderchannel  (SWIGTYPE_p_Agraph_t  g,  string format,
241              string channelname);
242
243       Render a layout to a malloc'ed string, to be free'd by the caller
244
245       (deprecated - too easy to leak memory)
246
247       (still needed for "eval [gv::renderdata $G tk]" )
248              string gv.renderdata (SWIGTYPE_p_Agraph_t g, string format);
249
250       Writing graph back to file
251              bool gv.write (SWIGTYPE_p_Agraph_t g, string filename);
252              bool gv.write (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_FILE f);
253
254       Graph transformation tools
255              bool gv.tred (SWIGTYPE_p_Agraph_t g);
256
257

KEYWORDS

259       graph, dot, neato, fdp, circo, twopi, R.
260
261
262
263
264                                 06 April 2020                          gv(3r)