1csg_fmatch(1) General Commands Manual csg_fmatch(1)
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6 csg_fmatch - Part of the VOTCA package
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9 csg_fmatch [OPTION] [OPTIONPARAMETERS]
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12 Perform force matching (also called multiscale coarse-graining)
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14 Please visit the program site at __http://www.votca.org__.
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17 Allowed options:
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20 -h [ --help ]
21 display this help and exit
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23 --verbose
24 be loud and noisy
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26 --verbose1
27 be very loud and noisy
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29 -v [ --verbose2 ]
30 be extremly loud and noisy
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32 --top arg
33 atomistic topology file
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35 --options arg
36 options file for coarse graining
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38 --trj-force arg
39 coarse-grained trajectory containing forces of already known
40 interactions
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43 Mapping options:
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46 --cg arg
47 coarse graining mapping and bond definitions (xml-file)
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49 --map-ignore arg
50 list of molecules to ignore separated by ;
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52 --no-map
53 disable mapping and act on original trajectory
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56 Trajectory options:
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59 --trj arg
60 atomistic trajectory file
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62 --begin arg (=0)
63 skip frames before this time (only works for Gromacs files)
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65 --first-frame arg (=0)
66 start with this frame
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68 --nframes arg
69 process the given number of frames
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73 Written and maintained by the VOTCA Development Team <devs@votca.org>
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75 This Manual Page was converted from t2t format to the this format by
76 txt2tags (http://txt2tags.org) ! The t2t file was extracted from
77 'csg_fmatch --help' by help2t2t (version 1.6 )
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80 Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)
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82 Licensed under the Apache License, Version 2.0 (the "License"); you may
83 not use this file except in compliance with the License. You may
84 obtain a copy of the License at
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86 http://www.apache.org/licenses/LICENSE-2.0
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88 Unless required by applicable law or agreed to in writing, software
89 distributed under the License is distributed on an "AS IS" BASIS, WITH‐
90 OUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
91 See the License for the specific language governing permissions and
92 limitations under the License.
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97Version: 1.6 2020-04-18 00:00:00 csg_fmatch(1)