1GDCMTAR(1) DICOM Manipulation. GDCMTAR(1)
2
3
4
6 gdcmtar - Concatenate/Extract DICOM files.
7
9 gdcmtar [options] file-in file-out
10
12 The gdcmtar is a command line tool used to tar/untar multi-frames
13 images (including SIEMENS MOSAIC file)
14
16 file-in DICOM input filename
17
18 file-out DICOM output filename
19
21 specific options
22 --enhance Enhance (default)
23 -U --unenhance Unenhance
24 -M --mosaic Split SIEMENS Mosaic image into multiple frames.
25 --mosaic-private When splitting SIEMENS Mosaic image into multiple frames, preserve private attributes (advanced user only).
26 -p --pattern Specify trailing file pattern.
27 --root-uid Root UID.
28
29 general options
30 -h --help
31 print this help text and exit
32
33 -v --version
34 print version information and exit
35
36 -V --verbose
37 verbose mode (warning+error).
38
39 -W --warning
40 warning mode, print warning information
41
42 -E --error
43 error mode, print error information
44
45 -D --debug
46 debug mode, print debug information
47
48 environment variable
49 GDCM_ROOT_UID Root UID
50
52 SIEMENS Mosaic
53 This option will turn a 2D frame containing sub-frame of a SIEMENS
54 MOSAIC into a set of MR Image Storage (legacy).
55
56 $ gdcminfo MR-sonata-3D-as-Tile.dcm
57
58 MediaStorage is 1.2.840.10008.5.1.4.1.1.4 [MR Image Storage]
59 TransferSyntax is 1.2.840.10008.1.2.1 [Explicit VR Little Endian]
60 NumberOfDimensions: 2
61 Dimensions: (384,384,1)
62 ...
63
64 $ gdcmtar --mosaic -i MR-sonata-3D-as-Tile.dcm -o mosaic --pattern %03d.dcm
65
66 Will output:
67
68 -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic000.dcm
69 -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic001.dcm
70 -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic002.dcm
71 -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic003.dcm
72 -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic004.dcm
73 -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic005.dcm
74 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic006.dcm
75 -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic007.dcm
76 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic008.dcm
77 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic009.dcm
78 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic010.dcm
79 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic011.dcm
80 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic012.dcm
81 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic013.dcm
82 -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic014.dcm
83 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic015.dcm
84 -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic016.dcm
85 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic017.dcm
86 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic018.dcm
87 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic019.dcm
88 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic020.dcm
89 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic021.dcm
90 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic022.dcm
91 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic023.dcm
92 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic024.dcm
93 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic025.dcm
94 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic026.dcm
95 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic027.dcm
96 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic028.dcm
97 -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic029.dcm
98 -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic030.dcm
99
100 $ gdcminfo mosaic000.dcm
101
102 MediaStorage is 1.2.840.10008.5.1.4.1.1.4 [MR Image Storage]
103 TransferSyntax is 1.2.840.10008.1.2.1 [Explicit VR Little Endian]
104 NumberOfDimensions: 2
105 Dimensions: (64,64,1)
106 ...
107
108 By default all private attributes are removed since they may not match
109 the newly generated SOP Instance. One way to preserve the private
110 attributes is to use the --mosaic-private command line option
111
112 $ gdcmtar --mosaic --mosaic-private -i MR-sonata-3D-as-Tile.dcm -o mosaic --pattern %03d.dcm
113
115 gdcmdump(1), gdcmraw(1), gdcminfo(1)
116
118 Mathieu Malaterre
119 Main developer
120
122 Copyright © 2006, 2011 Mathieu Malaterre
123
124
125
126GDCM 3.0.8 01/26/2021 GDCMTAR(1)