1dsrdump(1)                        OFFIS DCMTK                       dsrdump(1)
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NAME

6       dsrdump - Dump DICOM SR file and data set
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8

SYNOPSIS

10       dsrdump [options] dsrfile-in...
11

DESCRIPTION

13       The  dsrdump utility dumps the contents of a DICOM Structured Reporting
14       (SR) document (file format or raw data set) to stdout in textual  form.
15       The output of the document content follows the format proposed in David
16       Clunie's book 'DICOM Structured Reporting' (PixelMed Publishing, 2000).
17
18       If dsrdump reads a raw data set (DICOM data without a file format meta-
19       header)  it  will attempt to guess the transfer syntax by examining the
20       first few bytes of the file. It is not  always  possible  to  correctly
21       guess  the  transfer syntax and it is better to convert a data set to a
22       file format whenever possible (using the dcmconv utility). It  is  also
23       possible  to  use the -f and -t[ieb] options to force dsrdump to read a
24       dataset with a particular transfer syntax.
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PARAMETERS

27       dsrfile-in  DICOM SR input filename to be dumped
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OPTIONS

30   general options
31         -h    --help
32                 print this help text and exit
33
34               --version
35                 print version information and exit
36
37               --arguments
38                 print expanded command line arguments
39
40         -q    --quiet
41                 quiet mode, print no warnings and errors
42
43         -v    --verbose
44                 verbose mode, print processing details
45
46         -d    --debug
47                 debug mode, print debug information
48
49         -ll   --log-level  [l]evel: string constant
50                 (fatal, error, warn, info, debug, trace)
51                 use level l for the logger
52
53         -lc   --log-config  [f]ilename: string
54                 use config file f for the logger
55
56   input options
57       input file format:
58
59         +f    --read-file
60                 read file format or data set (default)
61
62         +fo   --read-file-only
63                 read file format only
64
65         -f    --read-dataset
66                 read data set without file meta information
67
68       input transfer syntax:
69
70         -t=   --read-xfer-auto
71                 use TS recognition (default)
72
73         -td   --read-xfer-detect
74                 ignore TS specified in the file meta header
75
76         -te   --read-xfer-little
77                 read with explicit VR little endian TS
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79         -tb   --read-xfer-big
80                 read with explicit VR big endian TS
81
82         -ti   --read-xfer-implicit
83                 read with implicit VR little endian TS
84
85   processing options
86       additional information:
87
88         -Ip   --processing-details
89                 show currently processed content item
90
91       error handling:
92
93         -Er   --unknown-relationship
94                 accept unknown/missing relationship type
95
96         -Ev   --invalid-item-value
97                 accept invalid content item value
98                 (e.g. violation of VR or VM definition)
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100         -Ec   --ignore-constraints
101                 ignore relationship content constraints
102
103         -Ee   --ignore-item-errors
104                 do not abort on content item errors, just warn
105                 (e.g. missing value type specific attributes)
106
107         -Ei   --skip-invalid-items
108                 skip invalid content items (including sub-tree)
109
110         -Dv   --disable-vr-checker
111                 disable check for VR-conformant string values
112
113       specific character set:
114
115         +U8   --convert-to-utf8
116                 convert all element values that are affected
117                 by Specific Character Set (0008,0005) to UTF-8
118
119                 # requires support from an underlying character encoding library
120                 # (see output of --version on which one is available)
121
122   output options
123       general printing:
124
125         +Pf   --print-filename
126                 print header with filename for each document
127
128         -Ph   --no-document-header
129                 do not print general document information
130
131         +Pn   --number-nested-items
132                 print position string in front of each line
133
134         -Pn   --indent-nested-items
135                 indent nested items by spaces (default)
136
137       printing values:
138
139         +Pl   --print-long-values
140                 print long item values completely
141
142         -Pl   --shorten-long-values
143                 print long item values shortened (default)
144
145         +Pu   --print-instance-uid
146                 print SOP instance UID of referenced objects
147
148         -Ps   --print-sopclass-short
149                 print short SOP class name of referenced image objects,
150                 e.g. "CT image" (default)
151
152         +Ps   --print-sopclass-long
153                 print long SOP class name of referenced objects
154
155         +Psu  --print-sopclass-uid
156                 print SOP class UID of referenced objects
157
158         +Pc   --print-all-codes
159                 print all codes (including concept name codes)
160
161         +Pi   --print-invalid-codes
162                 print invalid codes (for debugging purposes)
163
164         -Pi   --no-invalid-codes
165                 print text "invalid code" instead (default)
166
167         +Pt   --print-template-id
168                 print template identification information
169
170       enhanced encoding mode:
171
172         +Pe   --indicate-enhanced
173                 indicate that enhanced mode is used for codes
174
175         -Pe   --no-enhanced-mode
176                 do not indicate enhanced mode (default)
177
178       color:
179
180         +C    --print-color
181                 use ANSI escape codes for colored output
182
183                 # not available on Windows systems
184
185         -C    --no-color
186                 do not use any ANSI escape codes (default)
187
188                 # not available on Windows systems
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NOTES

191   DICOM Conformance
192       The dsrdump utility supports the following SOP Classes:
193
194       SpectaclePrescriptionReportStorage           1.2.840.10008.5.1.4.1.1.78.6
195       MacularGridThicknessAndVolumeReportStorage   1.2.840.10008.5.1.4.1.1.79.1
196       BasicTextSRStorage                           1.2.840.10008.5.1.4.1.1.88.11
197       EnhancedSRStorage                            1.2.840.10008.5.1.4.1.1.88.22
198       ComprehensiveSRStorage                       1.2.840.10008.5.1.4.1.1.88.33
199       Comprehensive3DSRStorage                     1.2.840.10008.5.1.4.1.1.88.34
200       ProcedureLogStorage                          1.2.840.10008.5.1.4.1.1.88.40
201       MammographyCADSRStorage                      1.2.840.10008.5.1.4.1.1.88.50
202       KeyObjectSelectionDocumentStorage            1.2.840.10008.5.1.4.1.1.88.59
203       ChestCADSRStorage                            1.2.840.10008.5.1.4.1.1.88.65
204       XRayRadiationDoseSRStorage                   1.2.840.10008.5.1.4.1.1.88.67
205       RadiopharmaceuticalRadiationDoseSRStorage    1.2.840.10008.5.1.4.1.1.88.68
206       ColonCADSRStorage                            1.2.840.10008.5.1.4.1.1.88.69
207       ImplantationPlanSRDocumentStorage            1.2.840.10008.5.1.4.1.1.88.70
208       AcquisitionContextSRStorage                  1.2.840.10008.5.1.4.1.1.88.71
209       SimplifiedAdultEchoSRStorage                 1.2.840.10008.5.1.4.1.1.88.72
210       PatientRadiationDoseSRStorage                1.2.840.10008.5.1.4.1.1.88.73
211       PlannedImagingAgentAdministrationSRStorage   1.2.840.10008.5.1.4.1.1.88.74
212       PerformedImagingAgentAdministrationSRStorage 1.2.840.10008.5.1.4.1.1.88.75
213

LOGGING

215       The level of logging output of  the  various  command  line  tools  and
216       underlying  libraries  can  be  specified by the user. By default, only
217       errors and warnings are written to the  standard  error  stream.  Using
218       option  --verbose  also  informational messages like processing details
219       are reported. Option --debug can be used to get  more  details  on  the
220       internal  activity,  e.g.  for debugging purposes. Other logging levels
221       can be selected using option --log-level. In --quiet  mode  only  fatal
222       errors  are reported. In such very severe error events, the application
223       will usually terminate. For  more  details  on  the  different  logging
224       levels, see documentation of module 'oflog'.
225
226       In  case  the logging output should be written to file (optionally with
227       logfile rotation), to syslog (Unix) or the event log  (Windows)  option
228       --log-config  can  be  used.  This  configuration  file also allows for
229       directing only certain messages to a particular output stream  and  for
230       filtering  certain  messages  based  on the module or application where
231       they are generated.  An  example  configuration  file  is  provided  in
232       <etcdir>/logger.cfg.
233

COMMAND LINE

235       All  command  line  tools  use  the  following notation for parameters:
236       square brackets enclose optional  values  (0-1),  three  trailing  dots
237       indicate  that multiple values are allowed (1-n), a combination of both
238       means 0 to n values.
239
240       Command line options are distinguished from parameters by a leading '+'
241       or  '-' sign, respectively. Usually, order and position of command line
242       options are arbitrary (i.e. they  can  appear  anywhere).  However,  if
243       options  are  mutually exclusive the rightmost appearance is used. This
244       behavior conforms to the  standard  evaluation  rules  of  common  Unix
245       shells.
246
247       In  addition,  one  or more command files can be specified using an '@'
248       sign as a prefix to the filename (e.g. @command.txt).  Such  a  command
249       argument  is  replaced  by  the  content of the corresponding text file
250       (multiple whitespaces are treated as a  single  separator  unless  they
251       appear  between  two  quotation marks) prior to any further evaluation.
252       Please note that a command file cannot contain  another  command  file.
253       This  simple  but  effective  approach  allows  one to summarize common
254       combinations of options/parameters and  avoids  longish  and  confusing
255       command lines (an example is provided in file <datadir>/dumppat.txt).
256

ENVIRONMENT

258       The  dsrdump  utility  will  attempt  to  load  DICOM data dictionaries
259       specified in the DCMDICTPATH environment variable. By default, i.e.  if
260       the   DCMDICTPATH   environment   variable   is   not   set,  the  file
261       <datadir>/dicom.dic will be loaded unless the dictionary is built  into
262       the application (default for Windows).
263
264       The   default   behavior   should  be  preferred  and  the  DCMDICTPATH
265       environment variable only used when alternative data  dictionaries  are
266       required.  The  DCMDICTPATH environment variable has the same format as
267       the Unix shell PATH variable in that a colon (':')  separates  entries.
268       On  Windows systems, a semicolon (';') is used as a separator. The data
269       dictionary code will  attempt  to  load  each  file  specified  in  the
270       DCMDICTPATH  environment variable. It is an error if no data dictionary
271       can be loaded.
272

SEE ALSO

274       dcmconv(1)
275
277       Copyright (C) 2000-2022 by OFFIS e.V., Escherweg  2,  26121  Oldenburg,
278       Germany.
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282Version 3.6.7                   Fri Apr 22 2022                     dsrdump(1)
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