1Bio::SeqIO::exp(3) User Contributed Perl Documentation Bio::SeqIO::exp(3)
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6 Bio::SeqIO::exp - exp trace sequence input/output stream
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9 Do not use this module directly. Use it via the Bio::SeqIO class.
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12 This object can transform Bio::Seq objects to and from exp trace files.
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15 Mailing Lists
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17 User feedback is an integral part of the evolution of this and other
18 Bioperl modules. Send your comments and suggestions preferably to one
19 of the Bioperl mailing lists. Your participation is much appreciated.
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21 bioperl-l@bioperl.org - General discussion
22 http://bioperl.org/wiki/Mailing_lists - About the mailing lists
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24 Reporting Bugs
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26 Report bugs to the Bioperl bug tracking system to help us keep track
27 the bugs and their resolution. Bug reports can be submitted via the
28 web:
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30 http://bugzilla.open-bio.org/
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33 Email: amackey@virginia.edu
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36 The rest of the documentation details each of the object methods.
37 Internal methods are usually preceded with a _
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39 next_seq
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41 Title : next_seq
42 Usage : $seq = $stream->next_seq()
43 Function: returns the next sequence in the stream
44 Returns : Bio::Seq::Quality object
45 Args : NONE
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47 write_seq
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49 Title : write_seq
50 Usage : $stream->write_seq(@seq)
51 Function: writes the $seq object into the stream
52 Returns : 1 for success and 0 for error
53 Args : Bio::Seq object
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57perl v5.8.8 2007-05-07 Bio::SeqIO::exp(3)