1csg_gmxtopol(1) General Commands Manual csg_gmxtopol(1)
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6 csg_gmxtopol - Part of the VOTCA package
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10 csg_gmxtopol [OPTION] [OPTIONPARAMETERS]
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14 Create skeleton for gromacs topology based on atomistic topology and a
15 mapping file. File still needs to be modified by the user.
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18 Please visit the program site at __http://www.votca.org__.
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22 Allowed options:
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25 -h [ --help ]
26 produce this help message
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28 --top arg
29 atomistic topology file
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31 --out arg
32 output topology (will create .top and in future also .itp)
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35 Mapping options:
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38 --cg arg
39 coarse graining mapping definitions (xml-file)
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41 --map-ignore arg
42 list of molecules to ignore separated by ;
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44 --no-map
45 disable mapping and act on original trajectory
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49 Written and maintained by the VOTCA Development Team <devs@votca.org>
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52 This Manual Page was converted from t2t format to the this format by
53 txt2tags (http://txt2tags.org) ! The t2t file was extracted from
54 'csg_gmxtopol --help' by help2t2t (version 1.2.1 )
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58 Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)
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61 Licensed under the Apache License, Version 2.0 (the "License"); you may
62 not use this file except in compliance with the License. You may
63 obtain a copy of the License at
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66 http://www.apache.org/licenses/LICENSE-2.0
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69 Unless required by applicable law or agreed to in writing, software
70 distributed under the License is distributed on an "AS IS" BASIS, WITH‐
71 OUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
72 See the License for the specific language governing permissions and
73 limitations under the License.
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80Version: 1.2.1 Thu Aug 25 20:00:27 UTC 2011 csg_gmxtopol(1)