1csg_gmxtopol(1)             General Commands Manual            csg_gmxtopol(1)
2
3
4

NAME

6       csg_gmxtopol - Part of the VOTCA package
7
8

SYNOPSIS

10       csg_gmxtopol [OPTION] [OPTIONPARAMETERS]
11
12

DESCRIPTION

14       Create  skeleton for gromacs topology based on atomistic topology and a
15       mapping file. File still needs to be modified by the user.
16
17
18       Please visit the program site at __http://www.votca.org__.
19
20

OPTIONS

22       Allowed options:
23
24
25       -h [ --help ]
26              display this help and exit
27
28       -v [ --verbose ]
29              be loud and noisy
30
31       --top arg
32              atomistic topology file
33
34       --out arg
35              output topology (will create .top and in future also .itp)
36
37
38       Mapping options:
39
40
41       --cg arg
42              coarse graining mapping and bond definitions (xml-file)
43
44       --map-ignore arg
45              list of molecules to ignore separated by ;
46
47       --no-map
48              disable mapping and act on original trajectory
49
50

AUTHORS

52       Written and maintained by the VOTCA Development Team <devs@votca.org>
53
54
55       This Manual Page was converted from t2t format to the  this  format  by
56       txt2tags  (http://txt2tags.org)  !   The  t2t  file  was extracted from
57       'csg_gmxtopol --help' by help2t2t (version 1.5.1 )
58
59
61       Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)
62
63
64       Licensed under the Apache License, Version 2.0 (the "License"); you may
65       not  use  this  file  except  in  compliance with the License.  You may
66       obtain a copy of the License at
67
68
69           http://www.apache.org/licenses/LICENSE-2.0
70
71
72       Unless required by applicable law or agreed  to  in  writing,  software
73       distributed under the License is distributed on an "AS IS" BASIS, WITH‐
74       OUT WARRANTIES OR CONDITIONS OF ANY KIND, either  express  or  implied.
75       See  the  License  for  the specific language governing permissions and
76       limitations under the License.
77
78
79
80
81
82
83Version: 1.5.1                2019-11-22 00:00:00              csg_gmxtopol(1)
Impressum