1CSG_DLPTOPOL(1) General Commands Manual CSG_DLPTOPOL(1)
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6 csg_dlptopol - Part of the VOTCA package
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11 csg_dlptopol [OPTIONS]
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13 csg_dlptopol [--help]
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18 Create a dlpoly topology template based on an existing (atomistic)
19 topology and a mapping xml-file. The created template file needs to be
20 inspected and amended by the user!
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22 * csg_dlptopol --top .dlpf --out .dlpf --cg cg-map.xml
23 convert FIELD to FIELD_CGV using cg-map.xml
24 * csg_dlptopol --top FA-dlpoly.dlpf --out CG-dlpoly.dlpf --cg cg-
25 map.xml
26 * csg_dlptopol --top FA-gromacs.tpr --out FA-dlpoly.dlpf --no-map
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33 Allowed options:
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35 -h [ --help ] display this help and exit
36 --verbose be loud and noisy
37 --verbose1 be very loud and noisy
38 -v [ --verbose2 ] be extremly loud and noisy
39 --top arg atomistic topology file
40 --out arg output topology in dlpoly format
41 Mapping options:
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43 --cg arg coarse graining mapping and bond
44 definitions
45 (xml-file)
46 --map-ignore arg list of molecules to ignore separated by ;
47 --no-map disable mapping and act on original
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52 Written and maintained by the VOTCA Development Team <devs@votca.org>
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57 Copyright 2009-2021 The VOTCA Development Team (http://www.votca.org)
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59 Licensed under the Apache License, Version 2.0 (the "License"); you may
60 not use this file except in compliance with the License. You may
61 obtain a copy of the License at
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63 http://www.apache.org/licenses/LICENSE-2.0
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65 Unless required by applicable law or agreed to in writing, software
66 distributed under the License is distributed on an "AS IS" BASIS,
67 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
68 implied. See the License for the specific language governing
69 permissions and limitations under the License.
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74VOTCA Development Team csg_dlptopol User Manual CSG_DLPTOPOL(1)